PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009590526.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 315aa    MW: 35133.9 Da    PI: 6.6244
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009590526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.8e-31156214259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YY+C+++ gC ++k+ver+++dp++++itY+ eHnh+
  XP_009590526.1 156 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCLARKQVERNRSDPNMFIITYTAEHNHP 214
                     79************************9988****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-31145216IPR003657WRKY domain
PROSITE profilePS5081135.175150216IPR003657WRKY domain
SuperFamilySSF1182901.44E-26153216IPR003657WRKY domain
SMARTSM007749.3E-37155215IPR003657WRKY domain
PfamPF031067.4E-26157214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MEEDWDLHAV VRSCTAANSA TTTTTSSSGS GSATISSCNF QPRLDDSNSF SFQDLYFDPR  60
FTTQNTAFEE LHELCKPFFN ESLLQKSPLI SPQRLLQDLP LQQQQFNQLN TKLIQPIKRP  120
LSSVNGAALH AQSPRSKRRK NQMKKICQVA ADALSSDMWS WRKYGQKPIK GSPYPRGYYK  180
CSTSKGCLAR KQVERNRSDP NMFIITYTAE HNHPMPTHRN SLAGISRHNK ETNSNKTTSS  240
SPVSSPVTNS PALENQESSR DEKEDIFEDE NDDFFEGLEE LESPAAGDSL PENFPGTLQF  300
PWLVNNAATT AAGGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-181542161677Probable WRKY transcription factor 4
2lex_A4e-181542161677Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009590526.10.0PREDICTED: WRKY transcription factor 22-like
SwissprotO046094e-83WRK22_ARATH; WRKY transcription factor 22
TrEMBLA0A0V0HZE11e-113A0A0V0HZE1_SOLCH; Putative WRKY transcription factor 22-like
TrEMBLK4AZP91e-113K4AZP9_SOLLC; Uncharacterized protein
STRINGSolyc01g095100.2.11e-113(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.17e-61WRKY family protein